Controlling a spacecraft’s orbit and attitude is one of the most complicated problems in control engineering due to uncertainties and nonlinearities. Control design methods for dealing with such issues may involve many calculations. Matlab software automates many design methods in its control system toolbox. Many other advanced design methods must also be automated to achieve fast and accurate controller design for more complex control systems. Quantitative feedback theory (QFT), as a powerful method for addressing the complex issues, requires plenty of calculations that make it necessary for the method to be automated. A QFT design toolbox is developed by Tersoft company. However, this toolbox cannot treat some practical issues, such as actuator saturation in its design process. In the QFT framework, saturation can be dealt with by Horowitz architecture or noninterfering loop architecture, containing an inner loop around the saturation element in the control loop. Error overshoot is a common problem with the saturation in control loops. Non-overshoot plant input, non-overshoot plant output and fast-vanishing plant input error are three constraints assumed in literature, to avoid this problem. These constraints can be translated to the constraints on inner loop compensator. This paper presents a comprehensive algorithm for automating the process of obtaining above mentioned constraints, with detailed flowcharts to facilitate software development. To verify the proposed algorithm, the boundary on the saturation loop compensator, for a hydraulic actuator is determined using computer codes implemented in the Matlab environment.